GOCOmpare: an R package to compare functional enrichment analysis results among gene lists and two species. Sosa C; Clavijo-Buriticá D; López-Rozo N; Riccio-Rengifo C, Diaz M, García Merchán V; Quimbaya M. 

Laser-Induced Graphene Sensor for in situ Detection and Quantification of Al3+ in soils. Autores: Vanessa Reyes, Jhonattan De La Roche, Drochss Pettry Valencia, Thaura Ghneim Herrera y Andrés Jaramillo Botero. Caltech, iÓMICAS, Pontificia Universidad Javeriana y Universidad Icesi.

Predicted tertiary structure of the plant G-protein coupled receptor (GCR1) coupled with the Galpha Protein (GPA1), with and without ligands. Authors: Hernández P;. Arango C; Jaramillo A; Kim S; Goddard W. 

Diseño e Implementación de un Sistema Portable de Bajo Costo para la Detección y Cuantificación de Gases de Efecto Invernadero en Cultivos Agrícolas. Autores: Drochss Valencia, Sebastián López, Germán Franco, Simón Plata y Andrés Jaramillo. Caltech, iÓMICAS y Pontificia Universidad Javeriana Cali

Multiscale plant modelling and phenotyping in OpenAlea. Author: Christophe Pradal PhD. CIRAD – Francia. 

Phenoagro: Sistema IoT para fenotipado de cultivos. Autores: Sebastián López, Daniel Felipe Valencia, Simón Plata, Orlando Charria, Luis Eduardo Tobón y Andrés Jaramillo. Caltech, iÓMICAS, Pontificia Universidad Javeriana Cali, CIAT, Hitech.

Characterization of correlation measures and hard-thresholding methods for generating gene co-expression networks. Case Study: Rice. Authors: Nicolás Antonio López Rozo, Miguel Romero, Jorge Finke y Camilo Rocha. Pontificia Universidad Javeriana Cali.

Graph subspace fusion from super-pixels for Biomass estimation. Autores: David Alejandro Jiménez Sierra, Hernán Darío Benítez Restrepo y Behnood Rasti. Pontificia Universidad Javeriana Cali, Helmholtz-Zentrum Dresden-Rossendorf: HZDR.

Genome-wide association mappingof two different genetic populations for low radiation tolerance in rice (Oryza sativa L.) (Oryza sativa L.). Autores: Yulieth Vargas Hernández, Alejandra Rubio Botero, Eliel Petro Páez y María Camila Rebolledo. Pontificia Universidad Javeriana Cali, CIAT, CIRAD.

Evaluación de caracteres morfológicos y fisiológicos para el fenotipado de tres variedades de caña de azúcar (Saccharum officinarum: Poaceae). Autores: Fernando Gordillo-Delgado, Julián David Arbeláez-Moreno y Daniel Felipe Casas-Castañeda. Universidad del Quindío.

Genomic prediction for tolerance to aluminum (Al) in a synthetic population of upland rice. Authors: Jérôme Bartholome, José Omar Ospina, Mario Sandoval, Jairo Arcos, Thaura Ghneim y Cécile Grenier. CIRAD, CIAT, FEDEARROZ, ICESI.

Evaluación de las emisiones de gases de efecto invernadero de diferentes cultivares de arroz en dos regiones colombianas. Autores: Oscar David Puentes Murcia, Nelson Fernando Amézquita Varón, Gabriel Alberto Garcés Varón, Natalia Espinosa Bayer, Sandra Patricia Loaiza Mera, Jorge Andrés Ardila Cuevas, Catalina Trujillo y Drochss Valencia. FEDEARROZ, CIAT.

A consolidated dataset to assess Gene co-expression in Saccharum spontaneum AP85-441. Autores: Nicolás López-Rozo, Mauricio Ramírez - Castrillón, Miguel Romero, Jorge Finke y Camilo Rocha. Pontificia Universidad Javeriana Cali.

Clasificación de genotipos de plantas de arroz por medio de imágenes aéreas multiespectrales. Autores: Andrés Felipe Duque Montenegro, Ingrid Zulay Casallas Rodríguez, Diego Alejandro Patiño Guevara y Julián David Colorado Montaño. Pontificia Universidad Javeriana Bogotá.

Storage and remobilization of carbohydrates after flowering and high sink strength index minimize rice yield loss in low radiation conditions. Autores: Eliel Petro Páez y María Camila Rebolledo. CIAT, CIRAD.

Desarrollo de un modelo de análisis utilizando minería de datos y aprendizaje automático para la optimización del riego en producción de maíz CL-86. Autor: Wilyereny Lorenzo Placencio. Instituto Especializado de Estudios Superiores Loyola - República Dominicana.

Redes de co-expresión en el mejoramiento de cultivos. Author: Riccio C. 

Geometrical-Probabilistic Approach to Protein Secondary Structure Assignment. Autores: Sergio Quintana, Carlos A. Arango, Daniela Tamayo y Laura Gil. Universidad Icesi.

Monitoreo fotoacústico de plántulas de banano Gros Michel infectadas con Fusarium oxysporum F. SP cubense Raza 1. Autores: Fernando Gordillo-Delgado, Sara Lizeth Cuellar-Ospina y Jhon Fredy González-Álvarez. Universidad del Quindío.

Elucidation of the role of gcr1 in the regulation of abscisic acid sensitivity and aluminium stress response through analysis of the Arabidopsis thaliana T-DNA MUTANT gcr1-2. Autores: Juliana Chaura, Vanessa Reyes, Fabián Tobar, Mauricio Quimbaya y Thaura Ghneim. Pontificia Universidad Javeriana Cali – Universidad Icesi.

Genome-wide bisulfite sequencing analysis of cultivated and wild rice species reveals epigenome variation in response to aluminum stress. Autores: Jenny Johana Gallo-Franco; Thaura Ghneim-Herrera; Fabián Tobar-Tosse; Mauricio Alberto Quimbaya. 

Caracterización de microbiomas bacterianos presentes en suelos cacaoteros con cadmio en Cundinamarca - Colombia. Autores: Wendy Ríos, Diego González, Michael Gribskov, Emiliano Barreto y Esperanza Torres. Universidad Nacional de Colombia.

Novel High-Throughput Methods for Multi-Scale Phenotyping in Agriculture. Autor: Colorado J. 

Evaluation of yield stability and productivity under flowering drought and aluminum toxicity in advanced rice crop lines (Oryza sativa ssp Japonica & spp. Indica). Autores: Jairo Antonio Arcos Jaramillo, José Omar Ospina, Mario Sandoval, Sandra Moreno, Johan Aparicio, Darío Pineda, Cecile Grenier y Thaura Ghneim. CIAT, ÓMICAS, CENICAFE, FEDEARROZ, ICESI, CIRAD.

Whole-genome DNA methylation patterns of Oryza sativa(L.) and Oryza glumaepatula(Steud) genotypes associated with aluminum response. Authors: Jenny Johana Gallo-Franco, ThauraGhneim-Herrera, Fabián Tobar-Tosse, Miguel Ángel Romero, Juliana Chaura & Mauricio Alberto Quimbaya

Análisis del microbioma fúngico presente en diferentes tipos de suelos cacaoteros con cadmio. Autores: Diego Alejandro González Bello, Alejandro Caro-Quintero, Michael Ray Gribskov y Esperanza Torres-Rojas. Universidad Nacional de Colombia, Purdue University.

Methylation in the CHH context allows to predict recombination in rice. Authors: Mauricio Peñuela, Jenny Johana Gallo-Franco, Jorge Finke, Camilo Rocha, Anestis Gkanogiannis, Thaura Ghneim Herrera, Mathias Lorieux

Diseño y desarrollo de nanosensores de grafeno para la detección de óxido nitroso (N2O) y metano (CH4). Autores: María Fernanda Hernández Rodríguez, Andrés Jaramillo Botero y Drochss Pettry Valencia. Caltech, iÓMICAS, Pontificia Universidad Javeriana Cali.

A Colorimetric Sensor for Detection of Aluminum (III) using Gold Nanoparticles. Autores: Mawin J. M. Jiménez, Andrés Jaramillo-Botero y Alba Ávila. Caltech, iÓMICAS, Pontificia Universidad Javeriana Cali, Uniandes.

Influence of lasing parameters on the surface and morphology of Laser Induced Graphene (LIG). Autores: Jhonattan De La Roche, Isabella López Cifuentes y Andrés Jaramillo Botero. Pontificia Universidad Javeriana Cali.

Blue noise sampling and nystrom extension for graph based change detection. Authors: Jimenez-Sierra DA; Benitez-Restrepo HD; Arce G; Florez-Ospina JF. 2021.  IEEE International Geoscience and Remote Sensing Symposium (IGARSS)

A Comparative Study of 3D Plant Modeling Systems based on Low-cost 2D LiDAR and Kinect. Authors: Murcia H; Sanabria D; Méndez D; Forero M. 2021.  13th Mexican conference on Pattern Recognition MCRP 2021

Uso de la Arabisdopsis thaliana como modelo de estudio para entender y encontrar potenciales nuevos genes asociados a procesos carcinogénicos. Authors: Sosa C; Clavijo-Buriticá D; Mosquera A; Álvarez A; Medina J y Quimbaya M. 

New Improvement in Obtaining Monogenic Phase Congruency. Authors: Jacanamejoy Ca; Forero M. 2021. 25th Iberoamerican Congress on Pattern Recognition

Partially-Oxidized Phosphorene-Based Sensors and Surface Oxidation Effects. Authors: Marmolejo-Tejada J.M.; Jaramillo-Botero A. 17th International Conferencia on Nanosciences & Nanotechnologies. 7-10 July 2020, Thessaloniki, Greece.

Abstracts Book. 

Meiotic recombination in rice is modified by structural genomic variation. Lorieux M. 

El gen AGO4 confiere resistencia a la variedad Fedearroz 2000 contra el Virus de la Hoja Blanca del arroz (Poster). Authors: Ocampo C.; Lorieux M.November 23-27, 2020, Cali, Colombia. 

Graphene nanoribbon devices for indirect sucrose detection and measurement. Author: Marmolejo J.M. November 23-27, 2020, Cali, Colombia. 

Tolerance to low radiation during grain filling stage in rice.  Authors: Petro E.; Rebolledo C. November 23-27, 2020, Cali, Colombia. 

Low-Cost and Portable Potentiostat for Electrochemical Impedance Spectroscopy Measurements. Author: Perdomo S.November 23-27, 2020, Cali, Colombia. 

Multi-layer reconstruction of the abiotic stress (Drought, Heat, HMR and ROS) response network in rice. Authors: Sosa C; Clavijo-Buriticá D; Quimbaya M. 

GFkuts: a novel multispectral image segmentation method applied to precision agriculture. Authors: Correa E; Calderon F; Colorado J. 

In-silico design of an all-armchair graphene nanoribbon field effect transistor (GNRFET) sensor for the detection of starch. Authors: López-Cifuentes I and Jaramillo-Botero A. 

PPT.

Sistema de Modelado Para la Reconstrucción 3d del Crecimiento de la variedad de arroz Oryza Sativa L. Authors: Jurado B;  Palacios J; Basante S; Arteaga W; Tobon L. 

Whole genome methylation patterns of Oryza sativa L.and Oryza glumaepatula Steud. genotypes with contrast response to aluminum stress. Authors: Gallo-Franco J.J., Ghneim-Herrera, T., Tobar-Tosse, F. & Quimbaya, M.

Using Graph Neural Networks for Identifying Overlapping Modules in Gene Co-expression Networks. Authors: Riccio C; Finke J; Rocha C. 

New Method for Epidermal Cells Detection in DIC images from Arabidopsis thaliana Leaves. Authors: Forero M; Jacanamejoy C; Lopez Y; Quimbaya M. 

In-silico Prediction of Pairwise Interactions Among Proteins in Rice. López-Rozo N; Finke J; Rocha  C. 

In Silico Design of Ligands for the Detectionof Sucrose at Ultra Lower Concentrations inPhysiological Condition. Authors: Lara-Cruz G; Jaramillo-Botero A. 

Integration of function hierarchy data for gene function prediction. Romero M; Finke J; Rocha  C. 

Multi-modal/temporal graph fusion for change detection in multi-spectral images. Authors: Jimenez-Sierra D; BenIitez-Restrepo H; y Vargas-Cardona H. 

Evaluación de la Tolerancia a Altas Temperaturas Nocturnas en Fase Reproductiva en arroz (Oryza spp.). Rubio A; Vargas Y;  Recio M; Quintero C, Rebolledo M.

Comparative study of point cloud registration techniques between ICP and others. Authors: Forero G; Méndez D; Murcía H. 2020. In Proceedings of the SPIE Optics+Photonics 2020, August, 24 - 28. San Diego, CA, USA. https://spie.org/OPO/conferencedetails/digital-image-processing#session-10

Development of a Simulation Tool for 3D Plant Modeling based on 2D LiDAR Sensor. Authors: Murcia H.F.; Sanabria D.A.; Méndez D.; Forero M. November 23-27, 2020, Cali, Colombia. 

Marker-Assisted breeding (SNPs) for the selection of sugarcane germplasm with greater efficiency in Sucrose Production and Efficient Use Nitrogen. Saavedra-Díaz C; Riascos J. 

Cancer hallmarks orthologues in Arabidopsis thaliana suggests partial overlap and potentiality as a research model for the disease. Authors: Sosa M.; Quimbaya M.; Cárdenas-Heredia R. 2020.  February 12 - 14, 2020. Leuven, Belgium. 

Fusion of Low-Density LiDAR Data with RGB Images for Plant 3D Modeling. Authors: García M.; Méndez D. Colorado J. November 23-27, 2020, Cali, Colombia. 

The Genomic Selection Strategy to Increase Sucrose Content in a Sugarcane Breeding Population. Jaimes-Quiñones H; Riascos J.

Differences in quality and composition of fats present in six commercial types of rice evaluated by optical characterization. Authors: García A.; Tirado L.; Franco J.F.; Fonthal G.  November 23-27, 2020, Cali, Colombia. 

Optimización de la nutrición en las nuevas variedades de caña de azúcar. Author: Muñoz F. 

Spatial Variation Prediction and Mapping of Soil Temperature. Authors: Martínez D.; Narducci M.  November 23-27, 2020, Cali, Colombia. 

UAV trajectory optimization for Precision Agriculture. Authors: Muñoz C.; Corredor J.; Patiño D.; Colorado J.  November 23-27, 2020, Cali, Colombia.

El efecto de la agricultura sobre gases de efecto invernadero. Valencia M.

Efecto del suministro de nanopartículas de dióxido de titanio incorporadas con plata en cultivo de espinaca (Spinacia oleracea L). Authors: Casas D.F.; Gordillo F; Garcia J.  November 23-27, 2020, Cali, Colombia.

N2O Emissions From Sugarcane Cultivated Soils in the Cauca River Valley, Colombia. Valencia-Molina M; Trujillo-Ospina C; Loaiza-Mera S; Munera-Castañeda B.

GWAS for low radiation tolerance during grain filling in rice (Oryza sativa L.). Authors: Vargas Y.; Rubio A.; Petro E.; Rebolledo C.  November 23-27, 2020, Cali, Colombia.

A novel role for GCR1 in the G-protein-mediated signaling process in plants. Authors: Hernández P.; Arango C.; Ghneim T; Goddard W.; Kim S.; Jaramillo-Botero A. November 23-27, 2020, Cali, Colombia. 

Use of NDVI as a tool to estimate N2O emissions in sugarcane crops. Valencia-Molina M; Trujillo-Ospina C; Loaiza-Mera S; Munera-Castañeda B.

In-silico gen annotation prediction using the co-expression network structure.  Authors: Romero M.; Finke J.; Quimbaya M.; Rocha C. In: Cherifi H.; Gaito S.; Mendes J.; Moro E.; Rocha L. (eds) Complex Networks and Their Applications VIII. COMPLEX NETWORKS 2019. Studies in Computational Intelligence, vol 882. Springer, Cham. Lisbon, Portugal. 

Doi: https://doi.org/10.1007/978-3-030-36683-4_64.

Análisis de la respuesta fotoluminiscente de diferentes clases comerciales de arroz. Authors: Franco-Escobar J.F.; Martínez-Hernández H.D; Fonthal G; Tirado-Mejía L​. XXVIII Congreso Nacional de Física 2019. ​September 9-12, 2019. 

Aerial Monitoring of Rice Crop Variables using an UAV Robotic System. Authors: Devia C.; Rojas J.; Petro E.; Martinez C.; Mondragon I.; Patino D.; Rebolledo C. and Colorad, J. (2019). In Proceedings of the 16th International Conference on Informatics in Control, Automation and Robotics - Volume 2: ICINCO, 29-31 July. Prague, Czech Republic, ISBN 978-989-758-380-3, pages 97-103.

DOI:10.5220/0007909900970103 https://www.scitepress.org/PublicationsDetail.aspx?ID=z7YDJoVCoNc=&t=1

Gradient-Descent based Nonlinear Model Predictive Control for Input-Affine Systems. Authors: Devia C.; Rojas J.; Petro E.; Martinez C.; Mondragon I.; Patino D.; Rebolledo C.; Colorado J.  The 6th International Conference on Control, Decision and Information Technologies (CODIT’19). April 23-26, 2019. Paris, France. https://ieeexplore.ieee.org/document/8820305